Datasets:
SauravMaheshkar
commited on
Commit
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af5dc77
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Parent(s):
ccbbdae
feat: add data objects
Browse files- .gitignore +1 -0
- processed/inductive/test_df.csv +0 -0
- processed/inductive/train_df.csv +0 -0
- processed/inductive/val_df.csv +0 -0
- processed/transductive/test_df.csv +0 -0
- processed/transductive/train_df.csv +0 -0
- processed/transductive/val_df.csv +0 -0
- raw/DATA-DESCRIPTION.txt +44 -0
- raw/NDC-substances-full-node-labels.txt +0 -0
- raw/NDC-substances-full-nverts.txt +0 -0
- raw/NDC-substances-full-simplex-labels.txt +0 -0
- raw/NDC-substances-full-simplices.txt +0 -0
- raw/NDC-substances-full-times.txt +0 -0
- raw/README.txt +11 -0
.gitignore
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**/.DS_Store
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processed/inductive/test_df.csv
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processed/inductive/train_df.csv
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processed/inductive/val_df.csv
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processed/transductive/test_df.csv
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processed/transductive/train_df.csv
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processed/transductive/val_df.csv
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raw/DATA-DESCRIPTION.txt
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Each timestamped simplex dataset consists of three files:
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1. dataset-nverts.txt
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2. dataset-simplices.txt
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3. dataset-times.txt
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All three files represent a vector of integers. There is one integer per line.
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The first file contains the number of vertices within each simplex. The second
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file is a contiguous list of the nodes comprising the simplices, where the
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ordering of the simplices is the same as in the first file. The third file
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contains the timestamps for each simplex. The length of the vectors in the first
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and third files is the same, and the length of the vector in the second file is
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the sum of the integers in the first file.
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Consider an example dataset consisting of three simplices:
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1. {1, 2, 3} at time 10
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2. {2, 4} at time 15.
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3. {1, 3, 4, 5} at time 21.
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Then files would look as follows:
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example-nverts.txt
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3
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2
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4
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example-simplices.xt
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1
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2
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3
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2
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4
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1
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3
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4
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5
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example-times.txt
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10
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15
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21
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For problems, please contact Austin Benson at [email protected].
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raw/NDC-substances-full-node-labels.txt
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raw/NDC-substances-full-nverts.txt
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raw/NDC-substances-full-simplex-labels.txt
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raw/NDC-substances-full-simplices.txt
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raw/NDC-substances-full-times.txt
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raw/README.txt
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This dataset consists of the substances that make up drugs in the National Drug
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Code Directory maintained by the Food and Drug Administration. The original data
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was downloaded from https://www.fda.gov/Drugs/InformationOnDrugs/ucm142438.htm.
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Each simplex corresponds to an NDC code for a drug, where the nodes are the
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substances that make up that drug. Timestamps are in days and represent when the
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drug was first marketed.
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The file NDC-substances-node-labels.txt maps the node IDs to the substances.
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The nth line in NDC-classes-simplex-labels.txt is the name of the drug
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corresponding to the nth simplex.
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