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unpredictable_ensembl-org

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22891f31_t__PDPK1_010__ENST00000464702___Flags
[Name] PDPK1-010 [Transcript ID] ENST00000464702 [bp] 511 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: PDPK1-010 (ENST00000464702)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000464702
36/1438042988598.68_20150728002308-00040-ip-10-236-191-2_423391983_0.json
22891f31_t__PDPK1_010__ENST00000464702___Flags
[Name] PDPK1-018 [Transcript ID] ENST00000569721 [bp] 330 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: PDPK1-010 (ENST00000464702)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000464702
36/1438042988598.68_20150728002308-00040-ip-10-236-191-2_423391983_0.json
22891f31_t__PDPK1_010__ENST00000464702___Flags
[Name] PDPK1-005 [Transcript ID] ENST00000491073 [bp] 2387 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
[]
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: PDPK1-010 (ENST00000464702)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000464702
36/1438042988598.68_20150728002308-00040-ip-10-236-191-2_423391983_0.json
22891f31_t__PDPK1_010__ENST00000464702___Flags
[Name] PDPK1-014 [Transcript ID] ENST00000570136 [bp] 1125 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: PDPK1-010 (ENST00000464702)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000140992;r=16:2587998-2647921;t=ENST00000464702
36/1438042988598.68_20150728002308-00040-ip-10-236-191-2_423391983_0.json
9ad6eebd__Gene__GSTM4__ENSG00000168765___Biotype
[Name] GSTM4-001 [Transcript ID] ENST00000369836 [bp] 1412 [Protein] 218aa [Translation ID] ENSP00000358851 [CCDS] CCDS807 [UniProt] Q03013 [RefSeq] NM_000850 NP_000841 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL2 - APPRIS candidate principal isoform (CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: GSTM4 (ENSG00000168765)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000168765;r=1:109656081-109674836
36/1438042988598.68_20150728002308-00312-ip-10-236-191-2_427934137_0.json
9ad6eebd__Gene__GSTM4__ENSG00000168765___Biotype
[Name] GSTM4-003 [Transcript ID] ENST00000326729 [bp] 1321 [Protein] 195aa [Translation ID] ENSP00000316471 [CCDS] CCDS806 [UniProt] Q03013 [RefSeq] NM_147148 NP_671489 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: GSTM4 (ENSG00000168765)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000168765;r=1:109656081-109674836
36/1438042988598.68_20150728002308-00312-ip-10-236-191-2_427934137_0.json
9ad6eebd__Gene__GSTM4__ENSG00000168765___Biotype
[Name] GSTM4-002 [Transcript ID] ENST00000369833 [bp] 3990 [Protein] 202aa [Translation ID] ENSP00000358848 [CCDS] - [UniProt] A6NNT0 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: GSTM4 (ENSG00000168765)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000168765;r=1:109656081-109674836
36/1438042988598.68_20150728002308-00312-ip-10-236-191-2_427934137_0.json
9ad6eebd__Gene__GSTM4__ENSG00000168765___Biotype
[Name] GSTM4-201 [Transcript ID] ENST00000336075 [bp] 657 [Protein] 218aa [Translation ID] ENSP00000336744 [CCDS] - [UniProt] A0A0A0MR85 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: GSTM4 (ENSG00000168765)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000168765;r=1:109656081-109674836
36/1438042988598.68_20150728002308-00312-ip-10-236-191-2_427934137_0.json
9ad6eebd__Gene__GSTM4__ENSG00000168765___Biotype
[Name] GSTM4-004 [Transcript ID] ENST00000495742 [bp] 1159 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: GSTM4 (ENSG00000168765)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000168765;r=1:109656081-109674836
36/1438042988598.68_20150728002308-00312-ip-10-236-191-2_427934137_0.json
9ad6eebd__Gene__GSTM4__ENSG00000168765___Biotype
[Name] GSTM4-011 [Transcript ID] ENST00000493171 [bp] 921 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: GSTM4 (ENSG00000168765)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000168765;r=1:109656081-109674836
36/1438042988598.68_20150728002308-00312-ip-10-236-191-2_427934137_0.json
9ad6eebd__Gene__GSTM4__ENSG00000168765___Biotype
[Name] GSTM4-012 [Transcript ID] ENST00000493395 [bp] 913 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: GSTM4 (ENSG00000168765)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000168765;r=1:109656081-109674836
36/1438042988598.68_20150728002308-00312-ip-10-236-191-2_427934137_0.json
9ad6eebd__Gene__GSTM4__ENSG00000168765___Biotype
[Name] GSTM4-008 [Transcript ID] ENST00000485640 [bp] 848 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: GSTM4 (ENSG00000168765)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000168765;r=1:109656081-109674836
36/1438042988598.68_20150728002308-00312-ip-10-236-191-2_427934137_0.json
9ad6eebd__Gene__GSTM4__ENSG00000168765___Biotype
[Name] GSTM4-006 [Transcript ID] ENST00000461767 [bp] 804 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: GSTM4 (ENSG00000168765)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000168765;r=1:109656081-109674836
36/1438042988598.68_20150728002308-00312-ip-10-236-191-2_427934137_0.json
9ad6eebd__Gene__GSTM4__ENSG00000168765___Biotype
[Name] GSTM4-005 [Transcript ID] ENST00000464733 [bp] 772 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: GSTM4 (ENSG00000168765)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000168765;r=1:109656081-109674836
36/1438042988598.68_20150728002308-00312-ip-10-236-191-2_427934137_0.json
9ad6eebd__Gene__GSTM4__ENSG00000168765___Biotype
[Name] GSTM4-010 [Transcript ID] ENST00000478397 [bp] 654 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: GSTM4 (ENSG00000168765)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000168765;r=1:109656081-109674836
36/1438042988598.68_20150728002308-00312-ip-10-236-191-2_427934137_0.json
9ad6eebd__Gene__GSTM4__ENSG00000168765___Biotype
[Name] GSTM4-007 [Transcript ID] ENST00000479578 [bp] 646 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Gene: GSTM4 (ENSG00000168765)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000168765;r=1:109656081-109674836
36/1438042988598.68_20150728002308-00312-ip-10-236-191-2_427934137_0.json
8cc51380__TSPAN32_002__ENST00000446063___Flags
[Name] TSPAN32-001 [Transcript ID] ENST00000182290 [bp] 1318 [Protein] 320aa [Translation ID] ENSP00000182290 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS7733 [UniProt] Q96QS1 [RefSeq] NM_139022 NP_620591 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL2 - APPRIS candidate principal isoform (CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TSPAN32-002 (ENST00000446063)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064201;r=11:2302013-2318142;t=ENST00000446063
36/1438042989443.69_20150728002309-00292-ip-10-236-191-2_426649202_0.json
8cc51380__TSPAN32_002__ENST00000446063___Flags
[Name] TSPAN32-201 [Transcript ID] ENST00000612299 [bp] 1301 [Protein] 265aa [Translation ID] ENSP00000482901 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] G3XAG6 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TSPAN32-002 (ENST00000446063)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064201;r=11:2302013-2318142;t=ENST00000446063
36/1438042989443.69_20150728002309-00292-ip-10-236-191-2_426649202_0.json
8cc51380__TSPAN32_002__ENST00000446063___Flags
[Name] TSPAN32-003 [Transcript ID] ENST00000451520 [bp] 1236 [Protein] 309aa [Translation ID] ENSP00000405205 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] D3YTD1 [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TSPAN32-002 (ENST00000446063)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064201;r=11:2302013-2318142;t=ENST00000446063
36/1438042989443.69_20150728002309-00292-ip-10-236-191-2_426649202_0.json
8cc51380__TSPAN32_002__ENST00000446063___Flags
[Name] TSPAN32-005 [Transcript ID] ENST00000381121 [bp] 999 [Protein] 253aa [Translation ID] ENSP00000370513 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Q96QS1 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TSPAN32-002 (ENST00000446063)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064201;r=11:2302013-2318142;t=ENST00000446063
36/1438042989443.69_20150728002309-00292-ip-10-236-191-2_426649202_0.json
8cc51380__TSPAN32_002__ENST00000446063___Flags
[Name] TSPAN32-014 [Transcript ID] ENST00000381117 [bp] 798 [Protein] 265aa [Translation ID] ENSP00000370509 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] G3XAG6 [RefSeq] - [Flags]
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TSPAN32-002 (ENST00000446063)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064201;r=11:2302013-2318142;t=ENST00000446063
36/1438042989443.69_20150728002309-00292-ip-10-236-191-2_426649202_0.json
8cc51380__TSPAN32_002__ENST00000446063___Flags
[Name] TSPAN32-002 [Transcript ID] ENST00000446063 [bp] 1262 [Protein] 258aa [Translation ID] ENSP00000395018 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] Q96QS1 [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TSPAN32-002 (ENST00000446063)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064201;r=11:2302013-2318142;t=ENST00000446063
36/1438042989443.69_20150728002309-00292-ip-10-236-191-2_426649202_0.json
8cc51380__TSPAN32_002__ENST00000446063___Flags
[Name] TSPAN32-004 [Transcript ID] ENST00000339046 [bp] 1202 [Protein] 143aa [Translation ID] ENSP00000343285 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] F8WCN6 [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TSPAN32-002 (ENST00000446063)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064201;r=11:2302013-2318142;t=ENST00000446063
36/1438042989443.69_20150728002309-00292-ip-10-236-191-2_426649202_0.json
8cc51380__TSPAN32_002__ENST00000446063___Flags
[Name] TSPAN32-007 [Transcript ID] ENST00000437313 [bp] 734 [Protein] 137aa [Translation ID] ENSP00000405001 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] F8WB10 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TSPAN32-002 (ENST00000446063)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064201;r=11:2302013-2318142;t=ENST00000446063
36/1438042989443.69_20150728002309-00292-ip-10-236-191-2_426649202_0.json
8cc51380__TSPAN32_002__ENST00000446063___Flags
[Name] TSPAN32-019 [Transcript ID] ENST00000483227 [bp] 886 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TSPAN32-002 (ENST00000446063)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064201;r=11:2302013-2318142;t=ENST00000446063
36/1438042989443.69_20150728002309-00292-ip-10-236-191-2_426649202_0.json
8cc51380__TSPAN32_002__ENST00000446063___Flags
[Name] TSPAN32-012 [Transcript ID] ENST00000479508 [bp] 741 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TSPAN32-002 (ENST00000446063)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064201;r=11:2302013-2318142;t=ENST00000446063
36/1438042989443.69_20150728002309-00292-ip-10-236-191-2_426649202_0.json
8cc51380__TSPAN32_002__ENST00000446063___Flags
[Name] TSPAN32-016 [Transcript ID] ENST00000484523 [bp] 582 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TSPAN32-002 (ENST00000446063)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064201;r=11:2302013-2318142;t=ENST00000446063
36/1438042989443.69_20150728002309-00292-ip-10-236-191-2_426649202_0.json
8cc51380__TSPAN32_002__ENST00000446063___Flags
[Name] TSPAN32-013 [Transcript ID] ENST00000486011 [bp] 411 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TSPAN32-002 (ENST00000446063)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064201;r=11:2302013-2318142;t=ENST00000446063
36/1438042989443.69_20150728002309-00292-ip-10-236-191-2_426649202_0.json
8cc51380__TSPAN32_002__ENST00000446063___Flags
[Name] TSPAN32-006 [Transcript ID] ENST00000461200 [bp] 3325 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TSPAN32-002 (ENST00000446063)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064201;r=11:2302013-2318142;t=ENST00000446063
36/1438042989443.69_20150728002309-00292-ip-10-236-191-2_426649202_0.json
8cc51380__TSPAN32_002__ENST00000446063___Flags
[Name] TSPAN32-008 [Transcript ID] ENST00000493924 [bp] 1573 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TSPAN32-002 (ENST00000446063)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064201;r=11:2302013-2318142;t=ENST00000446063
36/1438042989443.69_20150728002309-00292-ip-10-236-191-2_426649202_0.json
8cc51380__TSPAN32_002__ENST00000446063___Flags
[Name] TSPAN32-009 [Transcript ID] ENST00000498313 [bp] 988 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TSPAN32-002 (ENST00000446063)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064201;r=11:2302013-2318142;t=ENST00000446063
36/1438042989443.69_20150728002309-00292-ip-10-236-191-2_426649202_0.json
8cc51380__TSPAN32_002__ENST00000446063___Flags
[Name] TSPAN32-011 [Transcript ID] ENST00000484104 [bp] 725 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TSPAN32-002 (ENST00000446063)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064201;r=11:2302013-2318142;t=ENST00000446063
36/1438042989443.69_20150728002309-00292-ip-10-236-191-2_426649202_0.json
8cc51380__TSPAN32_002__ENST00000446063___Flags
[Name] TSPAN32-010 [Transcript ID] ENST00000493948 [bp] 641 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TSPAN32-002 (ENST00000446063)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000064201;r=11:2302013-2318142;t=ENST00000446063
36/1438042989443.69_20150728002309-00292-ip-10-236-191-2_426649202_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-001 [Transcript ID] ENST00000318584 [bp] 3332 [Protein] 495aa [Translation ID] ENSP00000326570 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS12691 [UniProt] A0A024R0R7 Q9H9S5 [RefSeq] NM_001039885 NM_024301 NP_001034974 NP_077277 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-002 [Transcript ID] ENST00000391909 [bp] 2801 [Protein] 495aa [Translation ID] ENSP00000375776 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS12691 [UniProt] A0A024R0R7 Q9H9S5 [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-013 [Transcript ID] ENST00000593877 [bp] 633 [Protein] 4aa [Translation ID] ENSP00000472850 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-016 [Transcript ID] ENST00000601299 [bp] 633 [Protein] 162aa [Translation ID] ENSP00000470103 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] M0QYV8 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-005 [Transcript ID] ENST00000600629 [bp] 597 [Protein] 80aa [Translation ID] ENSP00000470096 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] M0QYV4 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-025 [Transcript ID] ENST00000593875 [bp] 593 [Protein] 86aa [Translation ID] ENSP00000470297 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] M0QZ46 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-019 [Transcript ID] ENST00000598271 [bp] 592 [Protein] 29aa [Translation ID] ENSP00000471088 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] M0R092 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-011 [Transcript ID] ENST00000593800 [bp] 591 [Protein] 101aa [Translation ID] ENSP00000471209 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] M0R0G0 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-021 [Transcript ID] ENST00000597313 [bp] 584 [Protein] 59aa [Translation ID] ENSP00000472370 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] M0R274 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-026 [Transcript ID] ENST00000595570 [bp] 583 [Protein] 61aa [Translation ID] ENSP00000470929 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] M0R016 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-027 [Transcript ID] ENST00000593902 [bp] 577 [Protein] 137aa [Translation ID] ENSP00000470901 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] M0R005 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-008 [Transcript ID] ENST00000602250 [bp] 569 [Protein] 53aa [Translation ID] ENSP00000472807 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] M0R2U3 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-020 [Transcript ID] ENST00000596460 [bp] 569 [Protein] 68aa [Translation ID] ENSP00000469373 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] M0QXT8 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-024 [Transcript ID] ENST00000600227 [bp] 559 [Protein] 106aa [Translation ID] ENSP00000468825 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] M0QX03 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-009 [Transcript ID] ENST00000595868 [bp] 556 [Protein] 70aa [Translation ID] ENSP00000471573 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] M0R112 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-003 [Transcript ID] ENST00000600834 [bp] 551 [Protein] 72aa [Translation ID] ENSP00000470024 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] M0QYR2 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-004 [Transcript ID] ENST00000600005 [bp] 548 [Protein] 114aa [Translation ID] ENSP00000470335 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] M0QZ68 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-017 [Transcript ID] ENST00000594467 [bp] 545 [Protein] 35aa [Translation ID] ENSP00000471971 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] M0R1M1 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-010 [Transcript ID] ENST00000602181 [bp] 482 [Protein] 95aa [Translation ID] ENSP00000472981 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] M0R342 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-015 [Transcript ID] ENST00000600646 [bp] 584 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-006 [Transcript ID] ENST00000600977 [bp] 576 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-023 [Transcript ID] ENST00000596974 [bp] 568 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-007 [Transcript ID] ENST00000600872 [bp] 560 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-022 [Transcript ID] ENST00000597339 [bp] 420 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-014 [Transcript ID] ENST00000600681 [bp] 383 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-012 [Transcript ID] ENST00000597403 [bp] 322 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
13a3402d_pt__FKRP_006__ENST00000600977___Flags
[Name] FKRP-018 [Transcript ID] ENST00000593995 [bp] 545 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: FKRP-006 (ENST00000600977)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000181027;r=19:46746057-46755449;t=ENST00000600977
36/1438042989443.69_20150728002309-00225-ip-10-236-191-2_422151312_0.json
9e91fb6b_t__CPT1B_011__ENST00000479886___Flags
[Name] CPT1B-001 [Transcript ID] ENST00000395650 [bp] 2662 [Protein] 772aa [Translation ID] ENSP00000379011 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS14098 [UniProt] A0A024R4W7 Q92523 [RefSeq] NM_004377 NP_004368 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CPT1B-011 (ENST00000479886)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000479886
36/1438042988308.23_20150728002308-00237-ip-10-236-191-2_434944822_0.json
9e91fb6b_t__CPT1B_011__ENST00000479886___Flags
[Name] CPT1B-005 [Transcript ID] ENST00000405237 [bp] 2647 [Protein] 772aa [Translation ID] ENSP00000385486 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS14098 [UniProt] A0A024R4W7 Q92523 [RefSeq] NM_001145135 NM_001145137 NM_152245 NP_001138607 NP_001138609 NP_689451 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CPT1B-011 (ENST00000479886)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000479886
36/1438042988308.23_20150728002308-00237-ip-10-236-191-2_434944822_0.json
9e91fb6b_t__CPT1B_011__ENST00000479886___Flags
[Name] CPT1B-004 [Transcript ID] ENST00000312108 [bp] 2592 [Protein] 772aa [Translation ID] ENSP00000312189 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS14098 [UniProt] A0A024R4W7 Q92523 [RefSeq] NM_152246 NP_689452 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CPT1B-011 (ENST00000479886)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000479886
36/1438042988308.23_20150728002308-00237-ip-10-236-191-2_434944822_0.json
9e91fb6b_t__CPT1B_011__ENST00000479886___Flags
[Name] CPT1B-201 [Transcript ID] ENST00000360719 [bp] 2319 [Protein] 772aa [Translation ID] ENSP00000353945 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS14098 [UniProt] A0A024R4W7 Q92523 [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CPT1B-011 (ENST00000479886)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000479886
36/1438042988308.23_20150728002308-00237-ip-10-236-191-2_434944822_0.json
9e91fb6b_t__CPT1B_011__ENST00000479886___Flags
[Name] CPT1B-202 [Transcript ID] ENST00000457250 [bp] 2217 [Protein] 738aa [Translation ID] ENSP00000409342 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS46734 [UniProt] Q92523 [RefSeq] NM_001145134 NP_001138606 [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CPT1B-011 (ENST00000479886)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000479886
36/1438042988308.23_20150728002308-00237-ip-10-236-191-2_434944822_0.json
9e91fb6b_t__CPT1B_011__ENST00000479886___Flags
[Name] CPT1B-008 [Transcript ID] ENST00000417176 [bp] 558 [Protein] 125aa [Translation ID] ENSP00000406316 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] C9J7C3 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CPT1B-011 (ENST00000479886)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000479886
36/1438042988308.23_20150728002308-00237-ip-10-236-191-2_434944822_0.json
9e91fb6b_t__CPT1B_011__ENST00000479886___Flags
[Name] CPT1B-020 [Transcript ID] ENST00000423069 [bp] 719 [Protein] 92aa [Translation ID] ENSP00000396408 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H7C0S1 [RefSeq] - [Flags]
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CPT1B-011 (ENST00000479886)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000479886
36/1438042988308.23_20150728002308-00237-ip-10-236-191-2_434944822_0.json
9e91fb6b_t__CPT1B_011__ENST00000479886___Flags
[Name] CPT1B-014 [Transcript ID] ENST00000497224 [bp] 806 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CPT1B-011 (ENST00000479886)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000479886
36/1438042988308.23_20150728002308-00237-ip-10-236-191-2_434944822_0.json
9e91fb6b_t__CPT1B_011__ENST00000479886___Flags
[Name] CPT1B-007 [Transcript ID] ENST00000460853 [bp] 757 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CPT1B-011 (ENST00000479886)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000479886
36/1438042988308.23_20150728002308-00237-ip-10-236-191-2_434944822_0.json
9e91fb6b_t__CPT1B_011__ENST00000479886___Flags
[Name] CPT1B-013 [Transcript ID] ENST00000475238 [bp] 572 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CPT1B-011 (ENST00000479886)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000479886
36/1438042988308.23_20150728002308-00237-ip-10-236-191-2_434944822_0.json
9e91fb6b_t__CPT1B_011__ENST00000479886___Flags
[Name] CPT1B-010 [Transcript ID] ENST00000476790 [bp] 563 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CPT1B-011 (ENST00000479886)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000479886
36/1438042988308.23_20150728002308-00237-ip-10-236-191-2_434944822_0.json
9e91fb6b_t__CPT1B_011__ENST00000479886___Flags
[Name] CPT1B-009 [Transcript ID] ENST00000461117 [bp] 562 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CPT1B-011 (ENST00000479886)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000479886
36/1438042988308.23_20150728002308-00237-ip-10-236-191-2_434944822_0.json
9e91fb6b_t__CPT1B_011__ENST00000479886___Flags
[Name] CPT1B-011 [Transcript ID] ENST00000479886 [bp] 545 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CPT1B-011 (ENST00000479886)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000479886
36/1438042988308.23_20150728002308-00237-ip-10-236-191-2_434944822_0.json
0d100ae0_t__NTRK1_002__ENST00000497019___UniProt
[Name] NTRK1-001 [Transcript ID] ENST00000368196 [bp] 2701 [Protein] 790aa [Translation ID] ENSP00000357179 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS30891 [RefSeq] NM_001012331 NP_001012331 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [UniProt]
P04629 X5DR71
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Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NTRK1-002 (ENST00000497019)
UniProt
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000198400;r=1:156815679-156881849;t=ENST00000497019
36/1438042989443.69_20150728002309-00321-ip-10-236-191-2_428770504_0.json
0d100ae0_t__NTRK1_002__ENST00000497019___UniProt
[Name] NTRK1-004 [Transcript ID] ENST00000392302 [bp] 2609 [Protein] 760aa [Translation ID] ENSP00000376120 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS30890 [RefSeq] NM_001007792 NP_001007793 [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [UniProt]
P04629
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Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NTRK1-002 (ENST00000497019)
UniProt
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000198400;r=1:156815679-156881849;t=ENST00000497019
36/1438042989443.69_20150728002309-00321-ip-10-236-191-2_428770504_0.json
0d100ae0_t__NTRK1_002__ENST00000497019___UniProt
[Name] NTRK1-007 [Transcript ID] ENST00000524377 [bp] 2432 [Protein] 796aa [Translation ID] ENSP00000431418 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS1161 [RefSeq] NM_002529 NP_002520 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3 [UniProt]
P04629
[ [ "P", "0", "4", "6", "2", "9", " ", "X", "5", "D", "R", "7", "1" ], [ "P", "0", "4", "6", "2", "9" ], [ "J", "3", "K", "P", "2", "0" ], [ "E", "9", "P", "Q", "G", "0" ], [ "-" ] ]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NTRK1-002 (ENST00000497019)
UniProt
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000198400;r=1:156815679-156881849;t=ENST00000497019
36/1438042989443.69_20150728002309-00321-ip-10-236-191-2_428770504_0.json
0d100ae0_t__NTRK1_002__ENST00000497019___UniProt
[Name] NTRK1-006 [Transcript ID] ENST00000358660 [bp] 2492 [Protein] 793aa [Translation ID] ENSP00000351486 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [UniProt]
J3KP20
[ [ "P", "0", "4", "6", "2", "9", " ", "X", "5", "D", "R", "7", "1" ], [ "P", "0", "4", "6", "2", "9" ], [ "J", "3", "K", "P", "2", "0" ], [ "E", "9", "P", "Q", "G", "0" ], [ "-" ] ]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NTRK1-002 (ENST00000497019)
UniProt
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000198400;r=1:156815679-156881849;t=ENST00000497019
36/1438042989443.69_20150728002309-00321-ip-10-236-191-2_428770504_0.json
0d100ae0_t__NTRK1_002__ENST00000497019___UniProt
[Name] NTRK1-002 [Transcript ID] ENST00000497019 [bp] 2508 [Protein] 388aa [Translation ID] ENSP00000436804 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [UniProt]
E9PQG0
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Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NTRK1-002 (ENST00000497019)
UniProt
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000198400;r=1:156815679-156881849;t=ENST00000497019
36/1438042989443.69_20150728002309-00321-ip-10-236-191-2_428770504_0.json
0d100ae0_t__NTRK1_002__ENST00000497019___UniProt
[Name] NTRK1-011 [Transcript ID] ENST00000531606 [bp] 642 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [UniProt]
-
[ [ "P", "0", "4", "6", "2", "9", " ", "X", "5", "D", "R", "7", "1" ], [ "P", "0", "4", "6", "2", "9" ], [ "J", "3", "K", "P", "2", "0" ], [ "E", "9", "P", "Q", "G", "0" ], [ "-" ] ]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NTRK1-002 (ENST00000497019)
UniProt
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000198400;r=1:156815679-156881849;t=ENST00000497019
36/1438042989443.69_20150728002309-00321-ip-10-236-191-2_428770504_0.json
0d100ae0_t__NTRK1_002__ENST00000497019___UniProt
[Name] NTRK1-008 [Transcript ID] ENST00000489021 [bp] 570 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [UniProt]
-
[ [ "P", "0", "4", "6", "2", "9", " ", "X", "5", "D", "R", "7", "1" ], [ "P", "0", "4", "6", "2", "9" ], [ "J", "3", "K", "P", "2", "0" ], [ "E", "9", "P", "Q", "G", "0" ], [ "-" ] ]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NTRK1-002 (ENST00000497019)
UniProt
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000198400;r=1:156815679-156881849;t=ENST00000497019
36/1438042989443.69_20150728002309-00321-ip-10-236-191-2_428770504_0.json
0d100ae0_t__NTRK1_002__ENST00000497019___UniProt
[Name] NTRK1-005 [Transcript ID] ENST00000530298 [bp] 3052 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [UniProt]
-
[ [ "P", "0", "4", "6", "2", "9", " ", "X", "5", "D", "R", "7", "1" ], [ "P", "0", "4", "6", "2", "9" ], [ "J", "3", "K", "P", "2", "0" ], [ "E", "9", "P", "Q", "G", "0" ], [ "-" ] ]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NTRK1-002 (ENST00000497019)
UniProt
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000198400;r=1:156815679-156881849;t=ENST00000497019
36/1438042989443.69_20150728002309-00321-ip-10-236-191-2_428770504_0.json
0d100ae0_t__NTRK1_002__ENST00000497019___UniProt
[Name] NTRK1-010 [Transcript ID] ENST00000534682 [bp] 844 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [UniProt]
-
[ [ "P", "0", "4", "6", "2", "9", " ", "X", "5", "D", "R", "7", "1" ], [ "P", "0", "4", "6", "2", "9" ], [ "J", "3", "K", "P", "2", "0" ], [ "E", "9", "P", "Q", "G", "0" ], [ "-" ] ]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NTRK1-002 (ENST00000497019)
UniProt
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000198400;r=1:156815679-156881849;t=ENST00000497019
36/1438042989443.69_20150728002309-00321-ip-10-236-191-2_428770504_0.json
0d100ae0_t__NTRK1_002__ENST00000497019___UniProt
[Name] NTRK1-009 [Transcript ID] ENST00000533630 [bp] 645 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [UniProt]
-
[ [ "P", "0", "4", "6", "2", "9", " ", "X", "5", "D", "R", "7", "1" ], [ "P", "0", "4", "6", "2", "9" ], [ "J", "3", "K", "P", "2", "0" ], [ "E", "9", "P", "Q", "G", "0" ], [ "-" ] ]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NTRK1-002 (ENST00000497019)
UniProt
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000198400;r=1:156815679-156881849;t=ENST00000497019
36/1438042989443.69_20150728002309-00321-ip-10-236-191-2_428770504_0.json
b354b738_pt__OPTN_006__ENST00000263036___Flags
[Name] OPTN-005 [Transcript ID] ENST00000378748 [bp] 3521 [Protein] 577aa [Translation ID] ENSP00000368022 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS7094 [UniProt] Q96CV9 [RefSeq] NM_001008211 NM_001008213 NP_001008212 NP_001008214 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL2 - APPRIS candidate principal isoform (CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P2
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: OPTN-006 (ENST00000263036)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000123240;r=10:13099449-13136923;t=ENST00000263036
36/1438042988308.23_20150728002308-00283-ip-10-236-191-2_429208942_0.json
b354b738_pt__OPTN_006__ENST00000263036___Flags
[Name] OPTN-008 [Transcript ID] ENST00000378747 [bp] 3400 [Protein] 577aa [Translation ID] ENSP00000368021 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS7094 [UniProt] Q96CV9 [RefSeq] NM_001008212 NP_001008213 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL2 - APPRIS candidate principal isoform (CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P2
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: OPTN-006 (ENST00000263036)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000123240;r=10:13099449-13136923;t=ENST00000263036
36/1438042988308.23_20150728002308-00283-ip-10-236-191-2_429208942_0.json
b354b738_pt__OPTN_006__ENST00000263036___Flags
[Name] OPTN-007 [Transcript ID] ENST00000378757 [bp] 3321 [Protein] 577aa [Translation ID] ENSP00000368032 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS7094 [UniProt] Q96CV9 [RefSeq] NM_021980 NP_068815 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL2 - APPRIS candidate principal isoform (CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P2
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: OPTN-006 (ENST00000263036)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000123240;r=10:13099449-13136923;t=ENST00000263036
36/1438042988308.23_20150728002308-00283-ip-10-236-191-2_429208942_0.json
b354b738_pt__OPTN_006__ENST00000263036___Flags
[Name] OPTN-006 [Transcript ID] ENST00000263036 [bp] 2464 [Protein] 577aa [Translation ID] ENSP00000263036 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS7094 [UniProt] Q96CV9 [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL2 - APPRIS candidate principal isoform (CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P2
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: OPTN-006 (ENST00000263036)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000123240;r=10:13099449-13136923;t=ENST00000263036
36/1438042988308.23_20150728002308-00283-ip-10-236-191-2_429208942_0.json
b354b738_pt__OPTN_006__ENST00000263036___Flags
[Name] OPTN-004 [Transcript ID] ENST00000378752 [bp] 3488 [Protein] 571aa [Translation ID] ENSP00000368027 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Q96CV9 [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: OPTN-006 (ENST00000263036)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000123240;r=10:13099449-13136923;t=ENST00000263036
36/1438042988308.23_20150728002308-00283-ip-10-236-191-2_429208942_0.json
b354b738_pt__OPTN_006__ENST00000263036___Flags
[Name] OPTN-009 [Transcript ID] ENST00000378764 [bp] 2498 [Protein] 571aa [Translation ID] ENSP00000368040 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Q96CV9 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: OPTN-006 (ENST00000263036)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000123240;r=10:13099449-13136923;t=ENST00000263036
36/1438042988308.23_20150728002308-00283-ip-10-236-191-2_429208942_0.json
b354b738_pt__OPTN_006__ENST00000263036___Flags
[Name] OPTN-001 [Transcript ID] ENST00000424614 [bp] 664 [Protein] 126aa [Translation ID] ENSP00000400356 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H7C1H4 [RefSeq] - [Flags]
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: OPTN-006 (ENST00000263036)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000123240;r=10:13099449-13136923;t=ENST00000263036
36/1438042988308.23_20150728002308-00283-ip-10-236-191-2_429208942_0.json
b354b738_pt__OPTN_006__ENST00000263036___Flags
[Name] OPTN-012 [Transcript ID] ENST00000486862 [bp] 423 [Protein] 107aa [Translation ID] ENSP00000481473 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087WY28 [RefSeq] - [Flags]
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: OPTN-006 (ENST00000263036)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000123240;r=10:13099449-13136923;t=ENST00000263036
36/1438042988308.23_20150728002308-00283-ip-10-236-191-2_429208942_0.json
b354b738_pt__OPTN_006__ENST00000263036___Flags
[Name] OPTN-011 [Transcript ID] ENST00000430081 [bp] 848 [Protein] 62aa [Translation ID] ENSP00000414747 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] X6RKL2 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: OPTN-006 (ENST00000263036)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000123240;r=10:13099449-13136923;t=ENST00000263036
36/1438042988308.23_20150728002308-00283-ip-10-236-191-2_429208942_0.json
b354b738_pt__OPTN_006__ENST00000263036___Flags
[Name] OPTN-002 [Transcript ID] ENST00000482140 [bp] 667 [Protein] 58aa [Translation ID] ENSP00000484961 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] A0A087X2G2 [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: OPTN-006 (ENST00000263036)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000123240;r=10:13099449-13136923;t=ENST00000263036
36/1438042988308.23_20150728002308-00283-ip-10-236-191-2_429208942_0.json
b354b738_pt__OPTN_006__ENST00000263036___Flags
[Name] OPTN-003 [Transcript ID] ENST00000469025 [bp] 642 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: OPTN-006 (ENST00000263036)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000123240;r=10:13099449-13136923;t=ENST00000263036
36/1438042988308.23_20150728002308-00283-ip-10-236-191-2_429208942_0.json
b354b738_pt__OPTN_006__ENST00000263036___Flags
[Name] OPTN-010 [Transcript ID] ENST00000487935 [bp] 511 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: OPTN-006 (ENST00000263036)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000123240;r=10:13099449-13136923;t=ENST00000263036
36/1438042988308.23_20150728002308-00283-ip-10-236-191-2_429208942_0.json
85a622e6_t__CPT1B_011__ENST00000479886___Name
[Transcript ID] ENST00000395650 [bp] 2662 [Protein] 772aa [Translation ID] ENSP00000379011 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS14098 [UniProt] A0A024R4W7 Q92523 [RefSeq] NM_004377 NP_004368 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Name]
CPT1B-001
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CPT1B-011 (ENST00000479886)
Name
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000479886
36/1438042988308.23_20150728002308-00237-ip-10-236-191-2_434944822_0.json
85a622e6_t__CPT1B_011__ENST00000479886___Name
[Transcript ID] ENST00000405237 [bp] 2647 [Protein] 772aa [Translation ID] ENSP00000385486 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS14098 [UniProt] A0A024R4W7 Q92523 [RefSeq] NM_001145135 NM_001145137 NM_152245 NP_001138607 NP_001138609 NP_689451 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Name]
CPT1B-005
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CPT1B-011 (ENST00000479886)
Name
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000479886
36/1438042988308.23_20150728002308-00237-ip-10-236-191-2_434944822_0.json
85a622e6_t__CPT1B_011__ENST00000479886___Name
[Transcript ID] ENST00000312108 [bp] 2592 [Protein] 772aa [Translation ID] ENSP00000312189 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS14098 [UniProt] A0A024R4W7 Q92523 [RefSeq] NM_152246 NP_689452 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Name]
CPT1B-004
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CPT1B-011 (ENST00000479886)
Name
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000479886
36/1438042988308.23_20150728002308-00237-ip-10-236-191-2_434944822_0.json
85a622e6_t__CPT1B_011__ENST00000479886___Name
[Transcript ID] ENST00000360719 [bp] 2319 [Protein] 772aa [Translation ID] ENSP00000353945 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS14098 [UniProt] A0A024R4W7 Q92523 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Name]
CPT1B-201
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CPT1B-011 (ENST00000479886)
Name
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000479886
36/1438042988308.23_20150728002308-00237-ip-10-236-191-2_434944822_0.json
85a622e6_t__CPT1B_011__ENST00000479886___Name
[Transcript ID] ENST00000457250 [bp] 2217 [Protein] 738aa [Translation ID] ENSP00000409342 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS46734 [UniProt] Q92523 [RefSeq] NM_001145134 NP_001138606 [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Name]
CPT1B-202
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CPT1B-011 (ENST00000479886)
Name
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000205560;r=22:50818468-50818468;t=ENST00000479886
36/1438042988308.23_20150728002308-00237-ip-10-236-191-2_434944822_0.json