arjundd/meddlr-data · Datasets at Hugging Face

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[01/08 07:45:05] fvcore.common.checkpoint INFO: Saving checkpoint to /bmrNAS/people/arjun/results/meddlr/tests/basic/model_0000799.pth
[01/08 07:45:05] mr.data.datasets.register_mrco INFO: Loading /bmrNAS/people/arjun/code/meddlr/annotations/mridata_knee_2019/val.json takes 0.00 seconds
[01/08 07:45:05] mr.data.build INFO: Dropped 0 scans. 2 scans remaining
[01/08 07:45:05] mr.data.build INFO: Dropped references for 0/2 scans. 2 scans with reference remaining
[01/08 07:45:05] mr.evaluation.evaluator INFO: Start inference on 320 batches
[01/08 07:45:09] mr.evaluation.evaluator INFO: Inference done 11/320. 0.0251 s / img. ETA=0:00:48
[01/08 07:45:14] mr.evaluation.evaluator INFO: Inference done 43/320. 0.0227 s / img. ETA=0:00:43
[01/08 07:45:19] mr.evaluation.evaluator INFO: Inference done 75/320. 0.0224 s / img. ETA=0:00:38
[01/08 07:45:24] mr.evaluation.evaluator INFO: Inference done 107/320. 0.0224 s / img. ETA=0:00:33
[01/08 07:45:29] mr.evaluation.evaluator INFO: Inference done 139/320. 0.0223 s / img. ETA=0:00:28
[01/08 07:45:34] mr.evaluation.evaluator INFO: Inference done 171/320. 0.0223 s / img. ETA=0:00:23
[01/08 07:45:39] mr.evaluation.evaluator INFO: Inference done 203/320. 0.0223 s / img. ETA=0:00:18
[01/08 07:45:44] mr.evaluation.evaluator INFO: Inference done 235/320. 0.0223 s / img. ETA=0:00:13
[01/08 07:45:49] mr.evaluation.evaluator INFO: Inference done 267/320. 0.0223 s / img. ETA=0:00:08
[01/08 07:45:54] mr.evaluation.evaluator INFO: Inference done 299/320. 0.0222 s / img. ETA=0:00:03
[01/08 07:45:57] mr.evaluation.evaluator INFO: Total inference time: 0:00:49.500946 (0.157146 s / batch on 1 devices)
[01/08 07:45:57] mr.evaluation.evaluator INFO: Total inference pure compute time: 0:00:06 (0.022107 s / batch on 1 devices)
[01/08 07:46:07] mr.evaluation.scan_evaluator INFO: Structuring slices into volumes...
[01/08 07:46:07] mr.evaluation.scan_evaluator INFO: Structuring slices into volumes...
[01/08 07:46:10] mr.evaluation.recon_evaluation INFO: [ReconEvaluator] Slice metrics summary:
channel_0
--------------- --------------
val_nrmse 0.175 (0.043)
val_nrmse_mag 0.120 (0.032)
val_psnr 33.099 (2.996)
val_psnr_mag 36.426 (3.111)
val_ssim (Wang) 0.866 (0.082)

[01/08 07:46:10] mr.evaluation.recon_evaluation INFO: [ReconEvaluator] Scan metrics summary:
channel_0
-------------------- --------------
val_nrmse_mag_scan 0.111 (0.006)
val_nrmse_scan 0.163 (0.006)
val_psnr_mag_scan 44.388 (0.314)
val_psnr_scan 41.028 (0.479)
val_ssim (Wang)_scan 0.964 (0.002)

[01/08 07:46:10] mr.evaluation.evaluator INFO: Evaluation Time: 13.062179 s
[01/08 07:46:10] mr.engine.trainer INFO: Evaluation results for mridata_knee_2019_val in csv format:
[01/08 07:46:10] mr.evaluation.testing INFO: copypaste: val_nrmse,val_nrmse_mag,val_psnr,val_psnr_mag,val_ssim (Wang),val_nrmse_mag_scan,val_nrmse_scan,val_psnr_mag_scan,val_psnr_scan,val_ssim (Wang)_scan
[01/08 07:46:10] mr.evaluation.testing INFO: copypaste: 0.1754,0.1200,33.0992,36.4262,0.8660,0.1105,0.1627,44.3880,41.0275,0.9637
[01/08 07:46:10] mr.evaluation.testing INFO: Metrics (comma delimited):
val_nrmse,val_nrmse_mag,val_psnr,val_psnr_mag,val_ssim (Wang),val_nrmse_mag_scan,val_nrmse_scan,val_psnr_mag_scan,val_psnr_scan,val_ssim (Wang)_scan
0.1754,0.1200,33.0992,36.4262,0.8660,0.1105,0.1627,44.3880,41.0275,0.9637
[01/08 07:46:10] mr.utils.events INFO: eta: 0:07:32 iter: 799 loss: 15171.014 total_loss: 15171.014 time: 0.2411 data_time: 0.0001 lr: 0.000080 max_mem: 4238M
[01/08 07:46:16] mr.utils.events INFO: eta: 0:07:27 iter: 819 loss: 14583.270 total_loss: 14583.270 time: 0.2411 data_time: 0.0001 lr: 0.000082 max_mem: 4238M
[01/08 07:46:21] mr.utils.events INFO: eta: 0:07:23 iter: 839 loss: 14240.295 total_loss: 14240.295 time: 0.2411 data_time: 0.0001 lr: 0.000084 max_mem: 4238M
[01/08 07:46:26] mr.utils.events INFO: eta: 0:07:18 iter: 859 loss: 15098.030 total_loss: 15098.030 time: 0.2411 data_time: 0.0001 lr: 0.000086 max_mem: 4238M
[01/08 07:46:31] mr.utils.events INFO: eta: 0:07:13 iter: 879 loss: 15402.230 total_loss: 15402.230 time: 0.2412 data_time: 0.0001 lr: 0.000088 max_mem: 4238M
[01/08 07:46:36] mr.utils.events INFO: eta: 0:07:08 iter: 899 loss: 14225.305 total_loss: 14225.305 time: 0.2412 data_time: 0.0001 lr: 0.000090 max_mem: 4238M
[01/08 07:46:43] mr.utils.events INFO: eta: 0:07:04 iter: 919 loss: 13569.448 total_loss: 13569.448 time: 0.2412 data_time: 0.0001 lr: 0.000092 max_mem: 4238M
[01/08 07:46:48] mr.utils.events INFO: eta: 0:06:59 iter: 939 loss: 14107.779 total_loss: 14107.779 time: 0.2412 data_time: 0.0001 lr: 0.000094 max_mem: 4238M
[01/08 07:46:53] mr.utils.events INFO: eta: 0:06:54 iter: 959 loss: 14675.758 total_loss: 14675.758 time: 0.2413 data_time: 0.0001 lr: 0.000096 max_mem: 4238M
[01/08 07:46:58] mr.utils.events INFO: eta: 0:06:50 iter: 979 loss: 14544.494 total_loss: 14544.494 time: 0.2413 data_time: 0.0001 lr: 0.000098 max_mem: 4238M
[01/08 07:47:03] fvcore.common.checkpoint INFO: Saving checkpoint to /bmrNAS/people/arjun/results/meddlr/tests/basic/model_0000999.pth
[01/08 07:47:04] mr.data.datasets.register_mrco INFO: Loading /bmrNAS/people/arjun/code/meddlr/annotations/mridata_knee_2019/val.json takes 0.00 seconds
[01/08 07:47:04] mr.data.build INFO: Dropped 0 scans. 2 scans remaining
[01/08 07:47:04] mr.data.build INFO: Dropped references for 0/2 scans. 2 scans with reference remaining
[01/08 07:47:04] mr.evaluation.evaluator INFO: Start inference on 320 batches
[01/08 07:47:08] mr.evaluation.evaluator INFO: Inference done 11/320. 0.0250 s / img. ETA=0:00:48
[01/08 07:47:13] mr.evaluation.evaluator INFO: Inference done 43/320. 0.0227 s / img. ETA=0:00:43
[01/08 07:47:18] mr.evaluation.evaluator INFO: Inference done 75/320. 0.0225 s / img. ETA=0:00:38
[01/08 07:47:23] mr.evaluation.evaluator INFO: Inference done 107/320. 0.0225 s / img. ETA=0:00:33
[01/08 07:47:28] mr.evaluation.evaluator INFO: Inference done 139/320. 0.0224 s / img. ETA=0:00:28
[01/08 07:47:33] mr.evaluation.evaluator INFO: Inference done 171/320. 0.0224 s / img. ETA=0:00:23
[01/08 07:47:38] mr.evaluation.evaluator INFO: Inference done 203/320. 0.0223 s / img. ETA=0:00:18
[01/08 07:47:43] mr.evaluation.evaluator INFO: Inference done 235/320. 0.0223 s / img. ETA=0:00:13
[01/08 07:47:48] mr.evaluation.evaluator INFO: Inference done 267/320. 0.0223 s / img. ETA=0:00:08
[01/08 07:47:53] mr.evaluation.evaluator INFO: Inference done 299/320. 0.0223 s / img. ETA=0:00:03
[01/08 07:47:56] mr.evaluation.evaluator INFO: Total inference time: 0:00:49.544317 (0.157284 s / batch on 1 devices)
[01/08 07:47:56] mr.evaluation.evaluator INFO: Total inference pure compute time: 0:00:06 (0.022172 s / batch on 1 devices)
[01/08 07:48:06] mr.evaluation.scan_evaluator INFO: Structuring slices into volumes...
[01/08 07:48:06] mr.evaluation.scan_evaluator INFO: Structuring slices into volumes...
[01/08 07:48:09] mr.evaluation.recon_evaluation INFO: [ReconEvaluator] Slice metrics summary:
channel_0
--------------- --------------
val_nrmse 0.175 (0.042)
val_nrmse_mag 0.138 (0.030)
val_psnr 33.089 (3.029)
val_psnr_mag 35.133 (2.998)
val_ssim (Wang) 0.810 (0.075)

[01/08 07:48:09] mr.evaluation.recon_evaluation INFO: [ReconEvaluator] Scan metrics summary:
channel_0
-------------------- --------------
val_nrmse_mag_scan 0.129 (0.006)
val_nrmse_scan 0.163 (0.005)
val_psnr_mag_scan 43.045 (0.422)
val_psnr_scan 41.020 (0.545)
val_ssim (Wang)_scan 0.932 (0.011)

[01/08 07:48:09] mr.evaluation.evaluator INFO: Evaluation Time: 13.296574 s
[01/08 07:48:09] mr.engine.trainer INFO: Evaluation results for mridata_knee_2019_val in csv format:
[01/08 07:48:09] mr.evaluation.testing INFO: copypaste: val_nrmse,val_nrmse_mag,val_psnr,val_psnr_mag,val_ssim (Wang),val_nrmse_mag_scan,val_nrmse_scan,val_psnr_mag_scan,val_psnr_scan,val_ssim (Wang)_scan
[01/08 07:48:09] mr.evaluation.testing INFO: copypaste: 0.1755,0.1383,33.0890,35.1330,0.8102,0.1290,0.1628,43.0453,41.0200,0.9319
[01/08 07:48:09] mr.evaluation.testing INFO: Metrics (comma delimited):
val_nrmse,val_nrmse_mag,val_psnr,val_psnr_mag,val_ssim (Wang),val_nrmse_mag_scan,val_nrmse_scan,val_psnr_mag_scan,val_psnr_scan,val_ssim (Wang)_scan
0.1755,0.1383,33.0890,35.1330,0.8102,0.1290,0.1628,43.0453,41.0200,0.9319
[01/08 07:48:09] mr.utils.events INFO: eta: 0:05:40 iter: 999 loss: 14674.882 total_loss: 14674.882 time: 0.2413 data_time: 0.0001 lr: 0.000100 max_mem: 4240M
[01/08 07:48:15] mr.utils.events INFO: eta: 0:05:35 iter: 1019 loss: 14348.898 total_loss: 14348.898 time: 0.2413 data_time: 0.0001 lr: 0.000100 max_mem: 4240M

[01/08 07:45:05] fvcore.common.checkpoint INFO: Saving checkpoint to /bmrNAS/people/arjun/results/meddlr/tests/basic/model_0000799.pth

[01/08 07:45:05] mr.data.datasets.register_mrco INFO: Loading /bmrNAS/people/arjun/code/meddlr/annotations/mridata_knee_2019/val.json takes 0.00 seconds

[01/08 07:45:05] mr.data.build INFO: Dropped 0 scans. 2 scans remaining

[01/08 07:45:05] mr.data.build INFO: Dropped references for 0/2 scans. 2 scans with reference remaining

[01/08 07:45:05] mr.evaluation.evaluator INFO: Start inference on 320 batches

[01/08 07:45:09] mr.evaluation.evaluator INFO: Inference done 11/320. 0.0251 s / img. ETA=0:00:48

[01/08 07:45:14] mr.evaluation.evaluator INFO: Inference done 43/320. 0.0227 s / img. ETA=0:00:43

[01/08 07:45:19] mr.evaluation.evaluator INFO: Inference done 75/320. 0.0224 s / img. ETA=0:00:38

[01/08 07:45:24] mr.evaluation.evaluator INFO: Inference done 107/320. 0.0224 s / img. ETA=0:00:33

[01/08 07:45:29] mr.evaluation.evaluator INFO: Inference done 139/320. 0.0223 s / img. ETA=0:00:28

[01/08 07:45:34] mr.evaluation.evaluator INFO: Inference done 171/320. 0.0223 s / img. ETA=0:00:23

[01/08 07:45:39] mr.evaluation.evaluator INFO: Inference done 203/320. 0.0223 s / img. ETA=0:00:18

[01/08 07:45:44] mr.evaluation.evaluator INFO: Inference done 235/320. 0.0223 s / img. ETA=0:00:13

[01/08 07:45:49] mr.evaluation.evaluator INFO: Inference done 267/320. 0.0223 s / img. ETA=0:00:08

[01/08 07:45:54] mr.evaluation.evaluator INFO: Inference done 299/320. 0.0222 s / img. ETA=0:00:03

[01/08 07:45:57] mr.evaluation.evaluator INFO: Total inference time: 0:00:49.500946 (0.157146 s / batch on 1 devices)

[01/08 07:45:57] mr.evaluation.evaluator INFO: Total inference pure compute time: 0:00:06 (0.022107 s / batch on 1 devices)

[01/08 07:46:07] mr.evaluation.scan_evaluator INFO: Structuring slices into volumes...

[01/08 07:46:10] mr.evaluation.recon_evaluation INFO: [ReconEvaluator] Slice metrics summary:

channel_0

--------------- --------------

val_nrmse 0.175 (0.043)

val_nrmse_mag 0.120 (0.032)

val_psnr 33.099 (2.996)

val_psnr_mag 36.426 (3.111)

val_ssim (Wang) 0.866 (0.082)

[01/08 07:46:10] mr.evaluation.recon_evaluation INFO: [ReconEvaluator] Scan metrics summary:

channel_0

-------------------- --------------

val_nrmse_mag_scan 0.111 (0.006)

val_nrmse_scan 0.163 (0.006)

val_psnr_mag_scan 44.388 (0.314)

val_psnr_scan 41.028 (0.479)

val_ssim (Wang)_scan 0.964 (0.002)

[01/08 07:46:10] mr.evaluation.evaluator INFO: Evaluation Time: 13.062179 s

[01/08 07:46:10] mr.engine.trainer INFO: Evaluation results for mridata_knee_2019_val in csv format:

[01/08 07:46:10] mr.evaluation.testing INFO: copypaste: val_nrmse,val_nrmse_mag,val_psnr,val_psnr_mag,val_ssim (Wang),val_nrmse_mag_scan,val_nrmse_scan,val_psnr_mag_scan,val_psnr_scan,val_ssim (Wang)_scan

[01/08 07:46:10] mr.evaluation.testing INFO: copypaste: 0.1754,0.1200,33.0992,36.4262,0.8660,0.1105,0.1627,44.3880,41.0275,0.9637

[01/08 07:46:10] mr.evaluation.testing INFO: Metrics (comma delimited):

val_nrmse,val_nrmse_mag,val_psnr,val_psnr_mag,val_ssim (Wang),val_nrmse_mag_scan,val_nrmse_scan,val_psnr_mag_scan,val_psnr_scan,val_ssim (Wang)_scan

0.1754,0.1200,33.0992,36.4262,0.8660,0.1105,0.1627,44.3880,41.0275,0.9637

[01/08 07:46:10] mr.utils.events INFO: eta: 0:07:32 iter: 799 loss: 15171.014 total_loss: 15171.014 time: 0.2411 data_time: 0.0001 lr: 0.000080 max_mem: 4238M

[01/08 07:46:16] mr.utils.events INFO: eta: 0:07:27 iter: 819 loss: 14583.270 total_loss: 14583.270 time: 0.2411 data_time: 0.0001 lr: 0.000082 max_mem: 4238M

[01/08 07:46:21] mr.utils.events INFO: eta: 0:07:23 iter: 839 loss: 14240.295 total_loss: 14240.295 time: 0.2411 data_time: 0.0001 lr: 0.000084 max_mem: 4238M

[01/08 07:46:26] mr.utils.events INFO: eta: 0:07:18 iter: 859 loss: 15098.030 total_loss: 15098.030 time: 0.2411 data_time: 0.0001 lr: 0.000086 max_mem: 4238M

[01/08 07:46:31] mr.utils.events INFO: eta: 0:07:13 iter: 879 loss: 15402.230 total_loss: 15402.230 time: 0.2412 data_time: 0.0001 lr: 0.000088 max_mem: 4238M

[01/08 07:46:36] mr.utils.events INFO: eta: 0:07:08 iter: 899 loss: 14225.305 total_loss: 14225.305 time: 0.2412 data_time: 0.0001 lr: 0.000090 max_mem: 4238M

[01/08 07:46:43] mr.utils.events INFO: eta: 0:07:04 iter: 919 loss: 13569.448 total_loss: 13569.448 time: 0.2412 data_time: 0.0001 lr: 0.000092 max_mem: 4238M

[01/08 07:46:48] mr.utils.events INFO: eta: 0:06:59 iter: 939 loss: 14107.779 total_loss: 14107.779 time: 0.2412 data_time: 0.0001 lr: 0.000094 max_mem: 4238M

[01/08 07:46:53] mr.utils.events INFO: eta: 0:06:54 iter: 959 loss: 14675.758 total_loss: 14675.758 time: 0.2413 data_time: 0.0001 lr: 0.000096 max_mem: 4238M

[01/08 07:46:58] mr.utils.events INFO: eta: 0:06:50 iter: 979 loss: 14544.494 total_loss: 14544.494 time: 0.2413 data_time: 0.0001 lr: 0.000098 max_mem: 4238M

[01/08 07:47:03] fvcore.common.checkpoint INFO: Saving checkpoint to /bmrNAS/people/arjun/results/meddlr/tests/basic/model_0000999.pth

[01/08 07:47:04] mr.data.datasets.register_mrco INFO: Loading /bmrNAS/people/arjun/code/meddlr/annotations/mridata_knee_2019/val.json takes 0.00 seconds

[01/08 07:47:04] mr.data.build INFO: Dropped 0 scans. 2 scans remaining

[01/08 07:47:04] mr.data.build INFO: Dropped references for 0/2 scans. 2 scans with reference remaining

[01/08 07:47:04] mr.evaluation.evaluator INFO: Start inference on 320 batches

[01/08 07:47:08] mr.evaluation.evaluator INFO: Inference done 11/320. 0.0250 s / img. ETA=0:00:48

[01/08 07:47:13] mr.evaluation.evaluator INFO: Inference done 43/320. 0.0227 s / img. ETA=0:00:43

[01/08 07:47:18] mr.evaluation.evaluator INFO: Inference done 75/320. 0.0225 s / img. ETA=0:00:38

[01/08 07:47:23] mr.evaluation.evaluator INFO: Inference done 107/320. 0.0225 s / img. ETA=0:00:33

[01/08 07:47:28] mr.evaluation.evaluator INFO: Inference done 139/320. 0.0224 s / img. ETA=0:00:28

[01/08 07:47:33] mr.evaluation.evaluator INFO: Inference done 171/320. 0.0224 s / img. ETA=0:00:23

[01/08 07:47:38] mr.evaluation.evaluator INFO: Inference done 203/320. 0.0223 s / img. ETA=0:00:18

[01/08 07:47:43] mr.evaluation.evaluator INFO: Inference done 235/320. 0.0223 s / img. ETA=0:00:13

[01/08 07:47:48] mr.evaluation.evaluator INFO: Inference done 267/320. 0.0223 s / img. ETA=0:00:08

[01/08 07:47:53] mr.evaluation.evaluator INFO: Inference done 299/320. 0.0223 s / img. ETA=0:00:03

[01/08 07:47:56] mr.evaluation.evaluator INFO: Total inference time: 0:00:49.544317 (0.157284 s / batch on 1 devices)

[01/08 07:47:56] mr.evaluation.evaluator INFO: Total inference pure compute time: 0:00:06 (0.022172 s / batch on 1 devices)

[01/08 07:48:06] mr.evaluation.scan_evaluator INFO: Structuring slices into volumes...

[01/08 07:48:09] mr.evaluation.recon_evaluation INFO: [ReconEvaluator] Slice metrics summary:

channel_0

--------------- --------------

val_nrmse 0.175 (0.042)

val_nrmse_mag 0.138 (0.030)

val_psnr 33.089 (3.029)

val_psnr_mag 35.133 (2.998)

val_ssim (Wang) 0.810 (0.075)

[01/08 07:48:09] mr.evaluation.recon_evaluation INFO: [ReconEvaluator] Scan metrics summary:

channel_0

-------------------- --------------

val_nrmse_mag_scan 0.129 (0.006)

val_nrmse_scan 0.163 (0.005)

val_psnr_mag_scan 43.045 (0.422)

val_psnr_scan 41.020 (0.545)

val_ssim (Wang)_scan 0.932 (0.011)

[01/08 07:48:09] mr.evaluation.evaluator INFO: Evaluation Time: 13.296574 s

[01/08 07:48:09] mr.engine.trainer INFO: Evaluation results for mridata_knee_2019_val in csv format:

[01/08 07:48:09] mr.evaluation.testing INFO: copypaste: val_nrmse,val_nrmse_mag,val_psnr,val_psnr_mag,val_ssim (Wang),val_nrmse_mag_scan,val_nrmse_scan,val_psnr_mag_scan,val_psnr_scan,val_ssim (Wang)_scan

[01/08 07:48:09] mr.evaluation.testing INFO: copypaste: 0.1755,0.1383,33.0890,35.1330,0.8102,0.1290,0.1628,43.0453,41.0200,0.9319

[01/08 07:48:09] mr.evaluation.testing INFO: Metrics (comma delimited):

val_nrmse,val_nrmse_mag,val_psnr,val_psnr_mag,val_ssim (Wang),val_nrmse_mag_scan,val_nrmse_scan,val_psnr_mag_scan,val_psnr_scan,val_ssim (Wang)_scan

0.1755,0.1383,33.0890,35.1330,0.8102,0.1290,0.1628,43.0453,41.0200,0.9319

[01/08 07:48:09] mr.utils.events INFO: eta: 0:05:40 iter: 999 loss: 14674.882 total_loss: 14674.882 time: 0.2413 data_time: 0.0001 lr: 0.000100 max_mem: 4240M

[01/08 07:48:15] mr.utils.events INFO: eta: 0:05:35 iter: 1019 loss: 14348.898 total_loss: 14348.898 time: 0.2413 data_time: 0.0001 lr: 0.000100 max_mem: 4240M