Datasets:
Update Reproduction Info
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egrace479
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README.md
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@@ -65,6 +65,10 @@ English, Latin
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species_level_taxonomy_chains.csv
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taxon.tab
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licenses.csv
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visuals/
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kingodm_ToL_tree.html
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kingdom_ToL_tree.pdf
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@@ -135,6 +139,9 @@ Note that the `species` column occasionally has entries such as "sp. ___(get ex)
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| Taxonomic | _Animalia Chordata Aves Passeriformes Corvidae Pica hudsonia_ |
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`species_level_taxonomy_chains.csv`: CSV with the ITIS taxonomic hierarchy, indicated as follows:
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- `hierarchy_string_tsn`: string of Taxonomic Serial Numbers (TSN)* for the names of the ranks provided from highest to lowest, connected by dashes (eg., `202422-846491-660046-846497-846508-846553-954935-5549-5550`).
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- `hierarchy_string_names`: string of the names of the ranks provided from highest to lowest, connected by arrows (eg., `Plantae->Biliphyta->Rhodophyta->Cyanidiophytina->Cyanidiophyceae->Cyanidiales->Cyanidiaceae->Cyanidium->Cyanidium caldarium`).
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species_level_taxonomy_chains.csv
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taxon.tab
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licenses.csv
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naming/
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bioscan_name_lookup.json
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eol_name_lookup.json
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inat21_name_lookup.json
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visuals/
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kingodm_ToL_tree.html
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kingdom_ToL_tree.pdf
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| Taxonomic | _Animalia Chordata Aves Passeriformes Corvidae Pica hudsonia_ |
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`naming/`: these files provide the taxonomic name lookup for each data source in the reconstruction of the dataset.
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`species_level_taxonomy_chains.csv`: CSV with the ITIS taxonomic hierarchy, indicated as follows:
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- `hierarchy_string_tsn`: string of Taxonomic Serial Numbers (TSN)* for the names of the ranks provided from highest to lowest, connected by dashes (eg., `202422-846491-660046-846497-846508-846553-954935-5549-5550`).
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- `hierarchy_string_names`: string of the names of the ranks provided from highest to lowest, connected by arrows (eg., `Plantae->Biliphyta->Rhodophyta->Cyanidiophytina->Cyanidiophyceae->Cyanidiales->Cyanidiaceae->Cyanidium->Cyanidium caldarium`).
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